Diagenetic Modeling and PROFILE

Hogan, S., E. A.K. Murphy, M. P. Volaric, M. C. N. Castorani, P. Berg, M. A. Reidenbach. (In Review). Quantifying the influence of oyster reefs on infauna and sediment spatial distributions within intertidal mudflats.

Maciute, A., O. Holovachov, P. Berg, R. N. Glud, E. Broman, F. J. A. Nascimento, S. Bonaglia. (2021). A microsensor-based method for measuring respiration of individual nematodes. Methods in Ecology and Evolution. 12:1841–1847. https://doi.org/10.1111/2041-210X.13674

Carroll, C., N. Engström, P. F. Nilsson, E. R. Haxen, S. Mohlin, P. Berg, R. N. Glud, E. U. Hammarlund. (2021). Hypoxia generated by avian embryo growth induces the HIF-α response and critical vascularization. Frontiers in Ecology and Evolution, section Behavioral and Evolutionary Ecology. https://doi.org/10.3389/fevo.2021.675800

Glud, R. N., P. Berg, B. Thamdrup, M. Larsen, H. A. Stewart, A. J. Jamieson, H. Sanei, A. Rowden, F. Wenzhöfer. (2021). Hadal sediments are dynamic hotspots for deep-sea diagenesis. Nature Communications: Earth & Environment. 2: 1-8. https://doi.org/10.1038/s43247-020-00087-2

Jameson, B. D., P. Berg, D. S. Grundle, C. J. Stevens, S. Kim Juniper. (2020). Investigating Benthic N2O Production in Sediments Underlying the NE Pacific Oxygen Minimum Zone. Limnology and Oceanography: Letters. 6(2): 68-76. https://doi.org/10.1002/lol2.10174

[PDF] Howarth, R. W., M. Hayn,  R. M. Marino,  N. Ganju, K. Foreman, K. McGlathery, A. E. Giblin, P. Berg, J. D. Walker. (2014) Metabolism of a nitrogen-enriched coastal marine lagoon during the summertime. Biogeochemistry 118: 1-20. https://doi.org/10.1007/s10533-013-9901-x

[PDF] Hayn, M., R. Howarth, R. Marino, N. Ganju, P. Berg, K. H. Foreman, A. E. Giblin, K. McGlathery (2013) Exchange of nitrogen and phosphorus between a shallow lagoon and coastal waters. Estuaries and Coasts 37: S63-S73. https://doi.org/10.1007/s12237-013-9699-8

[PDF] Huettel, M., P. Berg, J. E. Kostka (2014) Benthic exchange and biogeochemical cycling in permeable sediments. Annual Review of Marine Science 6: 8.1-8.29. https://doi.org/10.1146/annurev-marine-051413-012706

[PDF] Long, M. H., J. E. Rheuban, P. Berg, J. C. Zieman (2012) A comparison and correction of light intensity loggers to photosynthetically active radiation sensors. Limnology and Oceanography: Methods 10: 416-424. https://doi.org/10.4319/lom.2012.10.416

[PDF] Koopmans, D. and P. Berg (2011) An alternative to traditional seepage meters: dye displacement. Water Resources Research 47. https://doi.org/10.1029/2010WR009113

[PDF] Glud, R. N., H. Stahl, P. Berg, F. Wenzhofer, K. Oguri, H. Kitazato (2009) In situ microscale variation in distribution and consumption of O2: a case study from a deep ocean margin sediment (Sagami Bay, Japan). Limnology and Oceanography 54: 1-12. https://doi.org/10.4319/lo.2009.54.1.0001

[PDF] Liao, Q., H. A. Bootsma, J. Xiao, J. Val Klump, A. Hume, M. H. Long, P. Berg (2009) Development of an in situ underwater particle image velocimetry (UWPIV) system. Limnology and Oceanography: Methods 7: 169-184. https://doi.org/10.4319/lom.2009.7.169

[PDF] Long, M. H., K. J. McGlathery, J. C. Zieman, P. Berg (2008) The role of organic acid exudates in liberating phosphorus from seagrass-vegetated carbonate sediments. Limnology and Oceanography 53: 2616-2626. https://doi.org/10.4319/lo.2008.53.6.2616

[PDF] Berg, P., D. Swaney, S. Rysgaard, B. Thamdrup, H. Fossing (2007) A fast numerical solution to the general mass-conservation equation for solutes and solids in aquatic sediments. Journal of Marine Research 65: 317-343. https://doi.org/10.1357/002224007781567649

[PDF] Glud, R. N., P. Berg, H. Fossing, B. B. Jorgensen (2007) Effect of the diffusive boundary layer on benthic mineralization and O2 distribution: a theoretical model analysis. Limnology and Oceanography 52: 547-557. https://doi.org/10.4319/lo.2007.52.2.0547

[PDF] Reynolds, L. K., P. Berg, J. C. Zieman (2007) Lucinid clam influence on the biogeochemistry of the seagrass thalassia testudinum sediments. Estuaries and Coasts 30: 482-490. https://doi.org/10.1007/BF02819394

[PDF] Hoffmann, C. C., P. Berg, M. Dahl, S. E. Larsen, H. E. Andersen, B. Andersen (2006) Groundwater flow and transport of nutrients through a riparian meadow – field data and modeling. Journal of Hydrology 331: 315-335. https://doi.org/10.1016/j.jhydrol.2006.05.019

[PDF] Ray, G. C., J. McCormick-Ray, P. Berg, H. E. Epstein (2006) Pacific walrus: benthic bioturbator of Beringia. Journal of Experimental Marine Biology and Ecology 330: 403-419. https://doi.org/10.1016/j.jembe.2005.12.043

[PDF] Meile, C., P. Berg, P. Van Cappellen, K. Tunca (2005) Solute-specific pore water irrigation: implications for chemical cycling in early diagenesis. Journal of Marine Research 63: 601-621. https://doi.org/10.1357/0022240054307885

[PDF] Elberling, B., B. H. Jakobsen, P. Berg, J. Sondergaard, C. Sigsgaard (2004) Influence of vegetation, temperature, and water content on soil carbon distribution and mineralization in four high arctic soils. Arctic, Antarctic, and Alpine Research 36: 528-538. DOI: 10.1657/1523-0430(2004)036[0528:IOVTAW]2.0.CO;2

[PDF] Berg, P., S. Rysgaard, B. Thamdrup (2003) Dynamic modeling of early diagenesis and nutrient cycling: a case study in an arctic marine sediment. American Journal of Science 303: 905-955. https://doi.org/10.2475/ajs.303.10.905

[PDF] Habicht, K. S., M. Gade, B. Thamdrup, P. Berg, D. E. Canfield (2002) Calibration of sulfate levels in the Archean ocean. Science 298: 2372-2374.  DOI: 10.1126/science.1078265

[PDF] Berg, P. and K. McGlathery (2001) A high-resolution pore water sampler for sandy sediments. Limnology and Oceanography 46: 203-210. https://doi.org/10.4319/lo.2001.46.1.0203

[PDF] Berg, P., S. Rysgaard, P. Funch, M. K. Sejr (2001) Effects of bioturbation on solutes and solids in marine sediments. Aquatic Microbial Ecology 26: 81-94. doi:10.3354/ame026081

[PDF] McGlathery, K. J., P. Berg, R. Marino (2001) Using porewater profiles to assess nutrient availability in seagrass-vegetated carbonate sediments. Biogeochemistry 56: 239-263. https://doi.org/10.1023/A:1013129811827

[PDF] Fossing, H., T. G. Ferdelman, P. Berg (2000) Sulfate reduction and methane oxidation in continental margin sediments influenced by irrigation (South-East Atlantic off Namibia). Geochimica et Cosmochimica Acta 64: 897-910. https://doi.org/10.1016/S0016-7037(99)00349-X

[PDF] Hoffmann, C. C., S. Rysgaard, P. Berg (2000) Denitrification rates predicted by nitrogen-15 labeled nitrate microcosm studies, in situ measurements, and modeling. Journal of Environmental Quality 29: 2020-2028. https://doi.org/10.2134/jeq2000.00472425002900060040x

[PDF] Rysgaard, S., P. Bondo Christensen, M. V. Sorensen, P. Funch, P. Berg (2000) Marine meiofauna, carbon and nitrogen mineralization in sandy and soft sediments of Disko Bay, West Greenland. Aquatic Microbial Ecology 21: 59-71. doi:10.3354/ame021059

[PDF] Berg, P. (1999) Long-term simulation of water movement in soils using mass-conserving procedures. Advances in Water Resources 22: 419-430. https://doi.org/10.1016/S0309-1708(98)00032-3

[PDF] Berg, P., N. Risgaard-Petersen, S. Rysgaard (1998) Interpretation of measured concentration profiles in sediment pore water. Limnology and Oceanography 43: 1500-1510. https://doi.org/10.4319/lo.1998.43.7.1500

[ZIP] PROFILE (profile interpretation procedure) from “Interpretation of measured concentration profiles in sediment pore water” in Limnology and Oceanography, (Berg et al, 1998)

[PDF] Rysgaard, S., B. Thamdrup, N. Risgaard-Petersen, H. Fossing, P. Berg, P. Bondo Christensen, T. Dalsgaard (1998) Seasonal carbon and nutrient mineralization in a high-Arctic coastal marine sediment, Young Sound, Northeast Greenland. Marine Ecology Progress Series 175: 261-276. doi:10.3354/meps175261

[PDF] Rysgaard, S., P. Berg (1996) Mineralization in a northeastern Greenland sediment: mathematical modeling, measured sediment pore water profiles and actual activities. Aquatic Microbial Ecology 11: 297-305. doi:10.3354/ame011297